Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm23949-201ENSMUST00000104027 127 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm12380-201ENSMUST00000119012 544 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm24749-201ENSMUST00000157838 343 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Mir1938-201ENSMUST00000158746 100 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm45433-201ENSMUST00000209386 247 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm26448-201ENSMUST00000082446 203 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm43999-201ENSMUST00000204286 2889 ntBASIC14.12□□□□□ -0.15
Nkx1-2P42580 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 CT868720.1-201ENSMUST00000223069 2544 ntBASIC14.11□□□□□ -0.15
Nkx1-2P42580 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.11□□□□□ -0.15
Nkx1-2P42580 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Gm43184-201ENSMUST00000197247 542 ntBASIC14.11□□□□□ -0.15
Nkx1-2P42580 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx1-2P42580 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm15711-201ENSMUST00000118889 535 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm28686-201ENSMUST00000187404 609 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm3332-201ENSMUST00000189337 928 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Gm7940-201ENSMUST00000218195 769 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 AC102569.1-201ENSMUST00000221563 685 ntBASIC14.1□□□□□ -0.15
Nkx1-2P42580 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx1-2P42580 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms