Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Timp3P39876 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Gm8737-201ENSMUST00000122208 642 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.48□□□□□ -0.89
Timp3P39876 Gm7666-201ENSMUST00000146631 819 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.48□□□□□ -0.89
Timp3P39876 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Gm17391-201ENSMUST00000171036 126 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Timp3P39876 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 AC122876.1-201ENSMUST00000217619 825 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.48□□□□□ -0.89
Timp3P39876 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.48□□□□□ -0.89
Timp3P39876 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Timp3P39876 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Timp3P39876 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.48□□□□□ -0.89
Timp3P39876 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Timp3P39876 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.48□□□□□ -0.89
Timp3P39876 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Timp3P39876 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Gm14665-201ENSMUST00000122294 557 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.47□□□□□ -0.89
Timp3P39876 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Gm5714-201ENSMUST00000197343 566 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC9.47□□□□□ -0.89
Timp3P39876 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.47□□□□□ -0.89
Timp3P39876 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.47□□□□□ -0.89
Timp3P39876 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.47□□□□□ -0.89
Timp3P39876 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.47□□□□□ -0.89
Timp3P39876 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Timp3P39876 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms