Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Rom1P32958 Rps4l-202ENSMUST00000204242 789 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC9.08□□□□□ -0.96
Rom1P32958 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Erich3-203ENSMUST00000189969 3460 ntBASIC9.08□□□□□ -0.96
Rom1P32958 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC9.08□□□□□ -0.96
Rom1P32958 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rom1P32958 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.07□□□□□ -0.96
Rom1P32958 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm11989-201ENSMUST00000117240 672 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm11362-201ENSMUST00000118838 850 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm24845-201ENSMUST00000158034 109 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm2546-201ENSMUST00000182630 991 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Gm44799-201ENSMUST00000207639 1202 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.07□□□□□ -0.96
Rom1P32958 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rom1P32958 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Rom1P32958 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Rom1P32958 Gm37122-201ENSMUST00000195313 1567 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Rom1P32958 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Rom1P32958 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.07□□□□□ -0.96
Rom1P32958 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.06□□□□□ -0.96
Rom1P32958 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.06□□□□□ -0.96
Rom1P32958 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Rom1P32958 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Rom1P32958 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms