Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm12363-201ENSMUST00000122250 668 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm38241-201ENSMUST00000192641 898 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm7783-201ENSMUST00000204795 781 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm9823-201ENSMUST00000051212 327 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Slc6a1P31648 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Slc6a1P31648 Rims2-204ENSMUST00000226410 3685 ntBASIC9.91□□□□□ -0.82
Slc6a1P31648 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC9.9□□□□□ -0.82
Slc6a1P31648 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Slc6a1P31648 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Slc6a1P31648 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gm8018-201ENSMUST00000173536 789 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.9□□□□□ -0.82
Slc6a1P31648 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.9□□□□□ -0.82
Slc6a1P31648 Gm5904-201ENSMUST00000210286 865 ntBASIC9.9□□□□□ -0.82
Slc6a1P31648 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Slc6a1P31648 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Slc6a1P31648 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Slc6a1P31648 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.9□□□□□ -0.83
Slc6a1P31648 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Slc6a1P31648 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Slc6a1P31648 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Slc6a1P31648 Erich3-203ENSMUST00000189969 3460 ntBASIC9.9□□□□□ -0.83
Slc6a1P31648 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Slc6a1P31648 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm14381-201ENSMUST00000122105 414 ntBASIC9.89□□□□□ -0.83
Slc6a1P31648 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.89□□□□□ -0.83
Slc6a1P31648 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC9.89□□□□□ -0.83
Slc6a1P31648 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Slc6a1P31648 Gm27320-201ENSMUST00000184892 109 ntBASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms