Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm12463-201ENSMUST00000118271 849 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Gm5419-201ENSMUST00000119301 527 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.54□□□□□ -0.72
Nedd8P29595 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm7029-201ENSMUST00000173226 450 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm27023-201ENSMUST00000182372 285 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Gm9192-201ENSMUST00000183221 985 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC10.54□□□□□ -0.72
Nedd8P29595 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.54□□□□□ -0.72
Nedd8P29595 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.54□□□□□ -0.72
Nedd8P29595 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Nedd8P29595 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.54□□□□□ -0.72
Nedd8P29595 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Gm12164-201ENSMUST00000121695 551 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.53□□□□□ -0.72
Nedd8P29595 Gm27702-201ENSMUST00000184512 56 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Gm7287-201ENSMUST00000205267 602 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Gm44771-201ENSMUST00000206975 626 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.53□□□□□ -0.72
Nedd8P29595 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Nedd8P29595 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Nedd8P29595 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nedd8P29595 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nedd8P29595 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nedd8P29595 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nedd8P29595 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Nedd8P29595 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Nedd8P29595 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nedd8P29595 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nedd8P29595 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nedd8P29595 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Nedd8P29595 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms