Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.86□□□□□ -0.51
Nfkb1P25799 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.86□□□□□ -0.51
Nfkb1P25799 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Nfkb1P25799 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nfkb1P25799 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm20495-201ENSMUST00000173902 235 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm23153-201ENSMUST00000175323 313 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm37905-201ENSMUST00000195310 341 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm5996-201ENSMUST00000211110 718 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.85□□□□□ -0.51
Nfkb1P25799 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.85□□□□□ -0.51
Nfkb1P25799 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nfkb1P25799 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nfkb1P25799 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Nfkb1P25799 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm8492-201ENSMUST00000182375 987 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm28324-201ENSMUST00000187913 264 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm38314-201ENSMUST00000195709 625 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 Gm42518-201ENSMUST00000196277 938 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.84□□□□□ -0.51
Nfkb1P25799 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms