Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC9.59□□□□□ -0.87
Col8a2P25318 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Col8a2P25318 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.59□□□□□ -0.87
Col8a2P25318 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Col8a2P25318 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Col8a2P25318 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.59□□□□□ -0.87
Col8a2P25318 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Col8a2P25318 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.88
Col8a2P25318 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Col8a2P25318 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm25492-201ENSMUST00000157383 129 ntBASIC9.58□□□□□ -0.88
Col8a2P25318 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Col8a2P25318 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Col8a2P25318 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm10752-201ENSMUST00000218348 729 ntBASIC9.58□□□□□ -0.88
Col8a2P25318 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.58□□□□□ -0.88
Col8a2P25318 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col8a2P25318 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Col8a2P25318 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Col8a2P25318 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Col8a2P25318 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.58□□□□□ -0.88
Col8a2P25318 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm11892-201ENSMUST00000117711 1202 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Col8a2P25318 Gm9089-201ENSMUST00000122027 526 ntBASIC9.57□□□□□ -0.88
Col8a2P25318 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC9.57□□□□□ -0.88
Col8a2P25318 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms