Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
RaraP11416 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
RaraP11416 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.44□□□□□ -0.42
RaraP11416 Gm43179-201ENSMUST00000198797 275 ntBASIC12.44□□□□□ -0.42
RaraP11416 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.44□□□□□ -0.42
RaraP11416 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.44□□□□□ -0.42
RaraP11416 Gm45433-201ENSMUST00000209386 247 ntBASIC12.44□□□□□ -0.42
RaraP11416 Gm45331-201ENSMUST00000209868 554 ntBASIC12.44□□□□□ -0.42
RaraP11416 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.44□□□□□ -0.42
RaraP11416 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.44□□□□□ -0.42
RaraP11416 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RaraP11416 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RaraP11416 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RaraP11416 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.43□□□□□ -0.42
RaraP11416 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
RaraP11416 Gm15711-201ENSMUST00000118889 535 ntBASIC12.43□□□□□ -0.42
RaraP11416 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.43□□□□□ -0.42
RaraP11416 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
RaraP11416 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.43□□□□□ -0.42
RaraP11416 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.43□□□□□ -0.42
RaraP11416 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.43□□□□□ -0.42
RaraP11416 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RaraP11416 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
RaraP11416 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
RaraP11416 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RaraP11416 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.42□□□□□ -0.42
RaraP11416 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RaraP11416 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Gm23596-201ENSMUST00000104304 132 ntBASIC12.42□□□□□ -0.42
RaraP11416 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.42□□□□□ -0.42
RaraP11416 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.42□□□□□ -0.42
RaraP11416 Mir1938-201ENSMUST00000158746 100 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm7584-201ENSMUST00000175829 940 ntBASIC12.42□□□□□ -0.42
RaraP11416 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
RaraP11416 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.42□□□□□ -0.42
RaraP11416 Mir7677-201ENSMUST00000184226 67 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm27320-201ENSMUST00000184892 109 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm28071-201ENSMUST00000190355 478 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RaraP11416 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.42□□□□□ -0.42
RaraP11416 Gm18038-201ENSMUST00000197900 485 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm6082-201ENSMUST00000215204 454 ntBASIC12.42□□□□□ -0.42
RaraP11416 Gm6867-201ENSMUST00000219165 425 ntBASIC12.42□□□□□ -0.42
RaraP11416 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.42□□□□□ -0.42
RaraP11416 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RaraP11416 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.42□□□□□ -0.42
RaraP11416 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 123.2 ms