Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Gm16505-201ENSMUST00000179981 232 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Gm6867-201ENSMUST00000219165 425 ntBASIC11.11□□□□□ -0.63
Fv4P11370 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.11□□□□□ -0.63
Fv4P11370 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.11□□□□□ -0.63
Fv4P11370 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.11□□□□□ -0.63
Fv4P11370 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.11□□□□□ -0.63
Fv4P11370 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Fv4P11370 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.11□□□□□ -0.63
Fv4P11370 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.11□□□□□ -0.63
Fv4P11370 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Fv4P11370 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Fv4P11370 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.1□□□□□ -0.63
Fv4P11370 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Fv4P11370 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Fv4P11370 Gm27530-201ENSMUST00000184096 98 ntBASIC11.1□□□□□ -0.63
Fv4P11370 Gm7003-201ENSMUST00000195089 312 ntBASIC11.1□□□□□ -0.63
Fv4P11370 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Gm45575-201ENSMUST00000210283 548 ntBASIC11.1□□□□□ -0.63
Fv4P11370 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Fv4P11370 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.1□□□□□ -0.63
Fv4P11370 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Fv4P11370 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Fv4P11370 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Fv4P11370 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Fv4P11370 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Gm12196-201ENSMUST00000120954 262 ntBASIC11.09□□□□□ -0.63
Fv4P11370 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.09□□□□□ -0.63
Fv4P11370 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.09□□□□□ -0.63
Fv4P11370 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.09□□□□□ -0.63
Fv4P11370 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Fv4P11370 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms