Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hoxc6P10629 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Matn2-203ENSMUST00000226766 3252 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm11700-201ENSMUST00000119409 403 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm45085-201ENSMUST00000209100 441 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm18035-201ENSMUST00000211962 589 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.74□□□□□ -0.37
Hoxc6P10629 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hoxc6P10629 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Hoxc6P10629 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm12906-201ENSMUST00000154610 441 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23400-201ENSMUST00000174994 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm26463-201ENSMUST00000175065 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm24332-201ENSMUST00000175102 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25959-201ENSMUST00000175112 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm22475-201ENSMUST00000175169 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm22903-201ENSMUST00000175193 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25070-201ENSMUST00000175237 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm24159-201ENSMUST00000175264 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25299-201ENSMUST00000175283 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23798-201ENSMUST00000175560 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23802-201ENSMUST00000175565 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25708-201ENSMUST00000177687 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm24370-201ENSMUST00000178007 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23049-201ENSMUST00000178068 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm28019-201ENSMUST00000178138 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25571-201ENSMUST00000178322 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25355-201ENSMUST00000178456 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm24975-201ENSMUST00000178492 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23189-201ENSMUST00000178954 102 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm25100-201ENSMUST00000179750 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm23064-201ENSMUST00000179866 101 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Gm9487-201ENSMUST00000216600 472 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Id2-203ENSMUST00000222667 958 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.73□□□□□ -0.37
Hoxc6P10629 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hoxc6P10629 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.73□□□□□ -0.37
Hoxc6P10629 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms