Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm16167-201ENSMUST00000160428 1065 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm25677-201ENSMUST00000174983 72 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm9162-201ENSMUST00000182081 991 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC14.83□□□□□ -0.04
Hoxc9P09633 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc9P09633 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc9P09633 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc9P09633 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC14.82□□□□□ -0.04
Hoxc9P09633 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 AC153962.2-201ENSMUST00000219417 550 ntBASIC14.82□□□□□ -0.04
Hoxc9P09633 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Gm40879-201ENSMUST00000220759 612 ntBASIC14.82□□□□□ -0.04
Hoxc9P09633 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc9P09633 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.82□□□□□ -0.04
Hoxc9P09633 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc9P09633 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm11957-201ENSMUST00000118304 779 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm4917-201ENSMUST00000121452 650 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm29763-201ENSMUST00000205306 616 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm45085-201ENSMUST00000209100 441 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.81□□□□□ -0.04
Hoxc9P09633 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc9P09633 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc9P09633 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Hoxc9P09633 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Hoxc9P09633 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms