Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.19□□□□□ -0.46
TnfP06804 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.19□□□□□ -0.46
TnfP06804 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
TnfP06804 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.19□□□□□ -0.46
TnfP06804 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.19□□□□□ -0.46
TnfP06804 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.19□□□□□ -0.46
TnfP06804 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.19□□□□□ -0.46
TnfP06804 Gm8492-201ENSMUST00000182375 987 ntBASIC12.19□□□□□ -0.46
TnfP06804 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.19□□□□□ -0.46
TnfP06804 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.19□□□□□ -0.46
TnfP06804 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TnfP06804 Gm43163-201ENSMUST00000196571 442 ntBASIC12.19□□□□□ -0.46
TnfP06804 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.19□□□□□ -0.46
TnfP06804 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.19□□□□□ -0.46
TnfP06804 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.19□□□□□ -0.46
TnfP06804 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.19□□□□□ -0.46
TnfP06804 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.19□□□□□ -0.46
TnfP06804 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.19□□□□□ -0.46
TnfP06804 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.19□□□□□ -0.46
TnfP06804 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TnfP06804 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.18□□□□□ -0.46
TnfP06804 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.18□□□□□ -0.46
TnfP06804 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TnfP06804 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.18□□□□□ -0.46
TnfP06804 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TnfP06804 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.18□□□□□ -0.46
TnfP06804 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.18□□□□□ -0.46
TnfP06804 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Gm21778-201ENSMUST00000178779 471 ntBASIC12.18□□□□□ -0.46
TnfP06804 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.18□□□□□ -0.46
TnfP06804 Gm37028-201ENSMUST00000194276 107 ntBASIC12.18□□□□□ -0.46
TnfP06804 Gm43002-201ENSMUST00000200310 155 ntBASIC12.18□□□□□ -0.46
TnfP06804 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TnfP06804 Gm18561-201ENSMUST00000206027 804 ntBASIC12.18□□□□□ -0.46
TnfP06804 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.18□□□□□ -0.46
TnfP06804 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.18□□□□□ -0.46
TnfP06804 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.18□□□□□ -0.46
TnfP06804 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
TnfP06804 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TnfP06804 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.18□□□□□ -0.46
TnfP06804 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
TnfP06804 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
TnfP06804 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.17□□□□□ -0.46
TnfP06804 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TnfP06804 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms