Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.69□□□□□ -0.86
Hoxa3P02831 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Hoxa3P02831 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Hoxa3P02831 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm22920-201ENSMUST00000102175 109 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm11949-201ENSMUST00000117640 372 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm14460-201ENSMUST00000121511 639 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm6450-201ENSMUST00000200896 574 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Hoxa3P02831 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.68□□□□□ -0.86
Hoxa3P02831 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Hoxa3P02831 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Hoxa3P02831 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.67□□□□□ -0.86
Hoxa3P02831 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.67□□□□□ -0.86
Hoxa3P02831 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Hoxa3P02831 Gm16166-201ENSMUST00000118291 787 ntBASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms