Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm9035-201ENSMUST00000218318 1697 ntBASIC13.65□□□□□ -0.22
Smarce1O54941 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarce1O54941 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Smarce1O54941 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Smarce1O54941 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.64□□□□□ -0.23
Smarce1O54941 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm24255-201ENSMUST00000104481 128 ntBASIC13.64□□□□□ -0.23
Smarce1O54941 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarce1O54941 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm18038-201ENSMUST00000197900 485 ntBASIC13.64□□□□□ -0.23
Smarce1O54941 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smarce1O54941 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.64□□□□□ -0.23
Smarce1O54941 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Smarce1O54941 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarce1O54941 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarce1O54941 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Smarce1O54941 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarce1O54941 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm26361-201ENSMUST00000158868 186 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.63□□□□□ -0.23
Smarce1O54941 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Mir8109-201ENSMUST00000184375 117 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.63□□□□□ -0.23
Smarce1O54941 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Gm270-201ENSMUST00000223010 976 ntBASIC13.63□□□□□ -0.23
Smarce1O54941 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarce1O54941 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarce1O54941 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms