Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf3O08791 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf3O08791 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf3O08791 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm11340-201ENSMUST00000119226 412 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Gm14942-201ENSMUST00000119642 336 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm22442-201ENSMUST00000157256 144 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm37981-201ENSMUST00000194280 535 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Ebf3O08791 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm19009-201ENSMUST00000223072 823 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.99□□□□□ -0.49
Ebf3O08791 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ebf3O08791 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ebf3O08791 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.98□□□□□ -0.49
Ebf3O08791 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm12628-201ENSMUST00000122193 382 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm24398-201ENSMUST00000157870 109 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm42599-201ENSMUST00000201308 469 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Gm19091-201ENSMUST00000208120 978 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.98□□□□□ -0.49
Ebf3O08791 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.98□□□□□ -0.49
Ebf3O08791 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.98□□□□□ -0.49
Ebf3O08791 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.98□□□□□ -0.49
Ebf3O08791 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ebf3O08791 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Ebf3O08791 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ebf3O08791 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Ebf3O08791 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ebf3O08791 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Ebf3O08791 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ebf3O08791 Gm25880-201ENSMUST00000104331 132 ntBASIC11.97□□□□□ -0.49
Ebf3O08791 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ebf3O08791 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms