Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm45784-201ENSMUST00000188360 142 ntBASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Gm6013-201ENSMUST00000212264 699 ntBASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Shisa8J3QNX5 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Shisa8J3QNX5 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.45□□□□□ -0.74
Shisa8J3QNX5 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.45□□□□□ -0.74
Shisa8J3QNX5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Shisa8J3QNX5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm9230-201ENSMUST00000188228 532 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm18187-201ENSMUST00000196476 984 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm8956-201ENSMUST00000203939 825 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Morn2-202ENSMUST00000227729 656 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm10312-201ENSMUST00000078515 489 ntBASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shisa8J3QNX5 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms