Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 AC138716.2-201ENSMUST00000226670 1016 ntBASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ccdc180J3QNE4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Gm25998-201ENSMUST00000175397 53 ntBASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Gm45135-201ENSMUST00000206787 1184 ntBASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ccdc180J3QNE4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gm15136-201ENSMUST00000120552 533 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Mir1893-201ENSMUST00000122565 83 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Platr10-202ENSMUST00000191479 818 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Ighv5-8-202ENSMUST00000191967 337 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gm8894-201ENSMUST00000074642 666 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Gm6170-201ENSMUST00000187672 1388 ntBASIC20.7■□□□□ 0.9
Ccdc180J3QNE4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Gm43102-201ENSMUST00000201004 2324 ntBASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Gm25677-201ENSMUST00000174983 72 ntBASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 AC156790.2-201ENSMUST00000227115 568 ntBASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ccdc180J3QNE4 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm23647-201ENSMUST00000175042 109 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Rn5s-201ENSMUST00000177555 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s108-201ENSMUST00000177575 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s121-201ENSMUST00000177589 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s146-201ENSMUST00000177889 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm22109-201ENSMUST00000177995 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm22291-201ENSMUST00000178027 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s141-201ENSMUST00000178066 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 Gm23284-201ENSMUST00000178069 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s100-201ENSMUST00000178106 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s111-201ENSMUST00000178203 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s105-201ENSMUST00000178499 119 ntBASIC20.68■□□□□ 0.9
Ccdc180J3QNE4 n-R5s149-201ENSMUST00000178520 119 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms