Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm25571-201ENSMUST00000178322 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25355-201ENSMUST00000178456 101 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm24975-201ENSMUST00000178492 101 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23189-201ENSMUST00000178954 102 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm25100-201ENSMUST00000179750 101 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm23064-201ENSMUST00000179866 101 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm5210-201ENSMUST00000182150 1010 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 CT030652.1-201ENSMUST00000227377 1235 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm10020-201ENSMUST00000081993 612 ntBASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcf11G3X9Z4 Ptprm-203ENSMUST00000224091 3773 ntBASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm9372-201ENSMUST00000168454 430 ntBASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm9574-201ENSMUST00000173127 845 ntBASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm25677-201ENSMUST00000174983 72 ntBASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm1995-201ENSMUST00000220838 2602 ntBASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcf11G3X9Z4 Gm15519-201ENSMUST00000120088 1566 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm45776-201ENSMUST00000212366 1522 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm8451-201ENSMUST00000170338 447 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm43667-201ENSMUST00000198616 1095 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 AC158388.3-202ENSMUST00000225517 775 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm5453-201ENSMUST00000080866 447 ntBASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcf11G3X9Z4 Gm15982-201ENSMUST00000121681 554 ntBASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Gm18010-201ENSMUST00000203553 202 ntBASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Gm44740-201ENSMUST00000205603 1614 ntBASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Erich3-203ENSMUST00000189969 3460 ntBASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcf11G3X9Z4 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms