Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.89□□□□□ -0.19
NpcdF8VQB8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.89□□□□□ -0.19
NpcdF8VQB8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.89□□□□□ -0.19
NpcdF8VQB8 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.89□□□□□ -0.19
NpcdF8VQB8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 AC107763.1-201ENSMUST00000226082 1365 ntBASIC13.88□□□□□ -0.19
NpcdF8VQB8 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Gm27956-201ENSMUST00000175604 260 ntBASIC13.88□□□□□ -0.19
NpcdF8VQB8 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.88□□□□□ -0.19
NpcdF8VQB8 Gm17931-201ENSMUST00000208132 634 ntBASIC13.88□□□□□ -0.19
NpcdF8VQB8 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NpcdF8VQB8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm4294-201ENSMUST00000105169 614 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm12247-201ENSMUST00000117585 670 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm9162-201ENSMUST00000182081 991 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm18035-201ENSMUST00000211962 589 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 AC174797.2-201ENSMUST00000225835 165 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm5449-201ENSMUST00000081132 357 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.87□□□□□ -0.19
NpcdF8VQB8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NpcdF8VQB8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms