Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube4aE9Q735 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ube4aE9Q735 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Gm24809-201ENSMUST00000175318 271 ntBASIC13.77□□□□□ -0.21
Ube4aE9Q735 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.77□□□□□ -0.21
Ube4aE9Q735 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Ube4aE9Q735 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm24791-201ENSMUST00000104284 131 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm12389-201ENSMUST00000117696 418 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm25830-201ENSMUST00000158923 132 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm26989-201ENSMUST00000182608 749 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm6390-201ENSMUST00000215034 589 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm8255-201ENSMUST00000218693 305 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm9102-201ENSMUST00000219250 465 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.76□□□□□ -0.21
Ube4aE9Q735 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ube4aE9Q735 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.75□□□□□ -0.21
Ube4aE9Q735 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.75□□□□□ -0.21
Ube4aE9Q735 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.75□□□□□ -0.21
Ube4aE9Q735 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.75□□□□□ -0.21
Ube4aE9Q735 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms