Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chd2E9PZM4 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm12463-201ENSMUST00000118271 849 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm20633-201ENSMUST00000176742 2831 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm10537-201ENSMUST00000192625 1698 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm29101-201ENSMUST00000188329 1471 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm7047-201ENSMUST00000196224 1063 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Gm18042-201ENSMUST00000219887 790 ntBASIC15.4■□□□□ 0.06
Chd2E9PZM4 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chd2E9PZM4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Chd2E9PZM4 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gm11235-201ENSMUST00000117763 333 ntBASIC15.39■□□□□ 0.05
Chd2E9PZM4 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gm37009-201ENSMUST00000193297 361 ntBASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gm42617-201ENSMUST00000197640 1229 ntBASIC15.39■□□□□ 0.05
Chd2E9PZM4 AC139155.1-201ENSMUST00000226043 444 ntBASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC15.39■□□□□ 0.05
Chd2E9PZM4 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chd2E9PZM4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm16480-201ENSMUST00000120439 832 ntBASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm14699-201ENSMUST00000122340 228 ntBASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm34248-201ENSMUST00000200027 474 ntBASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm9515-201ENSMUST00000200276 647 ntBASIC15.38■□□□□ 0.05
Chd2E9PZM4 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC15.38■□□□□ 0.05
Chd2E9PZM4 Atf7-201ENSMUST00000096143 390 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms