Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm5449-201ENSMUST00000081132 357 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Mir326-201ENSMUST00000083637 95 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.33□□□□□ -0.76
Shank1D3YZU1 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Shank1D3YZU1 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm11957-201ENSMUST00000118304 779 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm14270-201ENSMUST00000118388 846 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm12906-201ENSMUST00000154610 441 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm6114-201ENSMUST00000182472 968 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 AC162932.1-201ENSMUST00000219209 872 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm25562-201ENSMUST00000104608 133 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm13039-201ENSMUST00000118638 794 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm24954-201ENSMUST00000178831 110 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.32□□□□□ -0.76
Shank1D3YZU1 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Shank1D3YZU1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.31□□□□□ -0.76
Shank1D3YZU1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.31□□□□□ -0.76
Shank1D3YZU1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Shank1D3YZU1 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms