Protein–RNA interactions for Protein: B2RV38

Rd3l, BC048943 protein, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3lB2RV38 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rd3lB2RV38 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Rd3lB2RV38 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Rd3lB2RV38 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.05□□□□□ -0.8
Rd3lB2RV38 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Rd3lB2RV38 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm15547-201ENSMUST00000122152 333 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Rd3lB2RV38 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.04□□□□□ -0.8
Rd3lB2RV38 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm11989-201ENSMUST00000117240 672 ntBASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm11362-201ENSMUST00000118838 850 ntBASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm31256-201ENSMUST00000194705 506 ntBASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gzmn-202ENSMUST00000225535 989 ntBASIC10.03□□□□□ -0.8
Rd3lB2RV38 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.03□□□□□ -0.8
Rd3lB2RV38 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Rd3lB2RV38 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms