Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col4a6B1AVK5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col4a6B1AVK5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm27316-201ENSMUST00000184884 277 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm12947-201ENSMUST00000116114 420 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm5808-201ENSMUST00000178090 357 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm28671-201ENSMUST00000187036 692 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Gm40414-201ENSMUST00000197608 481 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col4a6B1AVK5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm22495-201ENSMUST00000104492 126 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm27826-201ENSMUST00000175282 255 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm18555-201ENSMUST00000197935 584 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Col4a6B1AVK5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col4a6B1AVK5 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.6□□□□□ -0.55
Col4a6B1AVK5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.6□□□□□ -0.55
Col4a6B1AVK5 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col4a6B1AVK5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms