Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm11949-201ENSMUST00000117640 372 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm3726-201ENSMUST00000203110 785 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.26□□□□□ -0.61
Chd3B1AR17 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.26□□□□□ -0.61
Chd3B1AR17 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.26□□□□□ -0.61
Chd3B1AR17 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chd3B1AR17 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm8197-202ENSMUST00000193422 934 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Chd3B1AR17 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.25□□□□□ -0.61
Chd3B1AR17 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.25□□□□□ -0.61
Chd3B1AR17 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chd3B1AR17 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Chd3B1AR17 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd3B1AR17 Gm12795-201ENSMUST00000117594 539 ntBASIC11.24□□□□□ -0.61
Chd3B1AR17 Gm15528-201ENSMUST00000117821 864 ntBASIC11.24□□□□□ -0.61
Chd3B1AR17 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms