Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm12619-201ENSMUST00000117369 385 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm14740-201ENSMUST00000118538 1150 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm10804-202ENSMUST00000162565 867 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm38376-201ENSMUST00000195493 2253 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Pdcd1lg2-201ENSMUST00000112576 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 AC122858.2-201ENSMUST00000228571 1362 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm6210-201ENSMUST00000204734 1942 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm42748-201ENSMUST00000199354 2341 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm12420-201ENSMUST00000119869 1048 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 A730090N16Rik-201ENSMUST00000160137 627 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 AC154435.1-201ENSMUST00000223938 959 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Olfr1393-201ENSMUST00000078932 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm43570-201ENSMUST00000199951 3688 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm5766-201ENSMUST00000160520 1977 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Scgn-201ENSMUST00000021770 1412 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Vmn1r221-201ENSMUST00000122275 1084 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm16288-201ENSMUST00000137940 367 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Scgb1b21-201ENSMUST00000170232 268 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Magea2-203ENSMUST00000178950 1299 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm7001-201ENSMUST00000219384 1465 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm9864-201ENSMUST00000090043 1656 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 AC153566.1-201ENSMUST00000216441 2057 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC5.88□□□□□ -1.47
Ubr4A2AN08 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Ubr4A2AN08 Gm6713-201ENSMUST00000216137 1446 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm14239-201ENSMUST00000116491 685 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm16350-201ENSMUST00000162958 446 ntTSL 2 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Gm44547-201ENSMUST00000207793 1446 ntBASIC5.87□□□□□ -1.47
Ubr4A2AN08 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Ubr4A2AN08 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms