Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mbd1Q9Z2E2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.75□□□□□ -0.53
Mbd1Q9Z2E2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mbd1Q9Z2E2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Mbd1Q9Z2E2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm26047-201ENSMUST00000157308 113 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm26047-202ENSMUST00000198840 115 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm6867-201ENSMUST00000219165 425 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Btrc-209ENSMUST00000224478 2194 ntBASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Mbd1Q9Z2E2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm8815-201ENSMUST00000173809 620 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm38151-201ENSMUST00000195085 289 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm6439-201ENSMUST00000199849 862 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Gm45575-201ENSMUST00000210283 548 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Mbd1Q9Z2E2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms