Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cldn9Q9Z0S7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Gm13916-201ENSMUST00000117368 628 ntBASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cldn9Q9Z0S7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm13461-201ENSMUST00000120980 662 ntBASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm14277-201ENSMUST00000121195 360 ntBASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm7150-201ENSMUST00000122032 981 ntBASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cldn9Q9Z0S7 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Cldn9Q9Z0S7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms