Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Mir3102-201ENSMUST00000175555 104 ntBASIC10.88□□□□□ -0.67
Trim3Q9R1R2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.88□□□□□ -0.67
Trim3Q9R1R2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Gm26448-201ENSMUST00000082446 203 ntBASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Trim3Q9R1R2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gm7848-201ENSMUST00000210739 718 ntBASIC10.87□□□□□ -0.67
Trim3Q9R1R2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Trim3Q9R1R2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm11509-201ENSMUST00000117358 325 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm15515-201ENSMUST00000117827 822 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm12566-201ENSMUST00000121479 359 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 B9d1os-201ENSMUST00000137010 674 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm3332-201ENSMUST00000189337 928 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Gm5705-201ENSMUST00000066241 711 ntBASIC10.86□□□□□ -0.67
Trim3Q9R1R2 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms