Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdh17Q9R100 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Cdh17Q9R100 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm15711-201ENSMUST00000118889 535 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm8815-201ENSMUST00000173809 620 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.21□□□□□ -0.61
Cdh17Q9R100 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdh17Q9R100 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.21□□□□□ -0.62
Cdh17Q9R100 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdh17Q9R100 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm25668-201ENSMUST00000157700 129 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm7584-201ENSMUST00000175829 940 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm10807-201ENSMUST00000177134 795 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm6867-201ENSMUST00000219165 425 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.2□□□□□ -0.62
Cdh17Q9R100 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdh17Q9R100 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms