Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm42979-201ENSMUST00000196287 2228 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm12384-201ENSMUST00000119228 919 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Rmrp-201ENSMUST00000157463 271 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm37922-201ENSMUST00000195596 455 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 AL732506.1-201ENSMUST00000226420 281 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Zfp185-201ENSMUST00000114546 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Wdr24-201ENSMUST00000026833 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Tmem255a-202ENSMUST00000089054 3311 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trem1Q9JKE2 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.27□□□□□ -0.76
Trem1Q9JKE2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm44914-201ENSMUST00000207191 2720 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm13612-201ENSMUST00000119276 390 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm44882-201ENSMUST00000205702 802 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm32025-201ENSMUST00000217960 307 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Rgr-203ENSMUST00000225070 4704 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trem1Q9JKE2 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.27□□□□□ -0.77
Trem1Q9JKE2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Ophn1-202ENSMUST00000113826 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm13497-201ENSMUST00000139497 2038 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trem1Q9JKE2 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms