Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.37□□□□□ -0.59
Lima1Q9ERG0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm9192-201ENSMUST00000183221 985 ntBASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm7783-201ENSMUST00000204795 781 ntBASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Lima1Q9ERG0 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm14381-201ENSMUST00000122105 414 ntBASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm37259-201ENSMUST00000193903 849 ntBASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm18893-201ENSMUST00000198416 943 ntBASIC11.35□□□□□ -0.59
Lima1Q9ERG0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms