Protein–RNA interactions for Protein: Q9DBT3

Ccdc97, Coiled-coil domain-containing protein 97, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc97Q9DBT3 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.83□□□□□ -0.52
Ccdc97Q9DBT3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm13296-201ENSMUST00000117854 997 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm17376-201ENSMUST00000166016 84 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm25700-201ENSMUST00000177693 110 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm4607-201ENSMUST00000206649 577 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm45224-201ENSMUST00000208203 414 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc97Q9DBT3 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm38241-201ENSMUST00000192641 898 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm6082-201ENSMUST00000215204 454 ntBASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc97Q9DBT3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms