Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm29499-201ENSMUST00000189151 486 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Gm28329-201ENSMUST00000191208 689 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Gm29171-201ENSMUST00000191397 486 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm13045-201ENSMUST00000119019 712 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm26047-201ENSMUST00000157308 113 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Mir3102-201ENSMUST00000175555 104 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Mir8093-201ENSMUST00000185043 137 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm10774-201ENSMUST00000188689 204 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm26047-202ENSMUST00000198840 115 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Chmp2aQ9DB34 Gm7841-201ENSMUST00000122108 1629 ntBASIC12□□□□□ -0.49
Chmp2aQ9DB34 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm15573-201ENSMUST00000119487 540 ntBASIC12□□□□□ -0.49
Chmp2aQ9DB34 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Gm38314-201ENSMUST00000195709 625 ntBASIC12□□□□□ -0.49
Chmp2aQ9DB34 Mir7686-201ENSMUST00000200604 57 ntBASIC12□□□□□ -0.49
Chmp2aQ9DB34 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12□□□□□ -0.49
Chmp2aQ9DB34 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms