Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp4bQ9D8B3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Chmp4bQ9D8B3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Gm13461-201ENSMUST00000120980 662 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Gm2128-201ENSMUST00000108009 2560 ntBASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Chmp4bQ9D8B3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm37931-201ENSMUST00000194686 2866 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm8199-201ENSMUST00000121323 823 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 AC160929.1-201ENSMUST00000221247 415 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Chmp4bQ9D8B3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Chmp4bQ9D8B3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp4bQ9D8B3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp4bQ9D8B3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Chmp4bQ9D8B3 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Chmp4bQ9D8B3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms