Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
U2af1Q9D883 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
U2af1Q9D883 AC169511.2-201ENSMUST00000226674 2063 ntBASIC15.13■□□□□ 0.01
U2af1Q9D883 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC15.13■□□□□ 0.01
U2af1Q9D883 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Gm44329-201ENSMUST00000197469 112 ntBASIC15.13■□□□□ 0.01
U2af1Q9D883 Gm9661-201ENSMUST00000221611 1122 ntBASIC15.13■□□□□ 0.01
U2af1Q9D883 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
U2af1Q9D883 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
U2af1Q9D883 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 AC122840.1-201ENSMUST00000220915 3334 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm4294-201ENSMUST00000105169 614 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm3329-201ENSMUST00000159873 556 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm37905-201ENSMUST00000195310 341 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm44551-201ENSMUST00000208804 171 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Gm6653-201ENSMUST00000218063 1288 ntBASIC15.12■□□□□ 0.01
U2af1Q9D883 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
U2af1Q9D883 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
U2af1Q9D883 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm15374-201ENSMUST00000119313 844 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm1848-201ENSMUST00000120711 789 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
U2af1Q9D883 Mir7076-201ENSMUST00000183519 74 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm37826-201ENSMUST00000195329 322 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.11■□□□□ 0.01
U2af1Q9D883 AC165260.2-203ENSMUST00000224237 336 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
U2af1Q9D883 Gm44755-201ENSMUST00000207830 2102 ntBASIC15.11■□□□□ 0.01
U2af1Q9D883 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms