Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Gm24891-201ENSMUST00000104391 136 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Gm45113-201ENSMUST00000207518 165 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cfap53Q9D439 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.66□□□□□ -0.38
Cfap53Q9D439 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm13263-201ENSMUST00000121271 838 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm18734-201ENSMUST00000172937 808 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Gm4482-201ENSMUST00000200876 742 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 Lect2-202ENSMUST00000225183 823 ntBASIC12.65□□□□□ -0.38
Cfap53Q9D439 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Cfap53Q9D439 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cfap53Q9D439 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms