Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Gm8199-201ENSMUST00000121323 823 ntBASIC13.47□□□□□ -0.25
Rufy3Q9D394 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Gm5733-201ENSMUST00000190232 939 ntBASIC13.47□□□□□ -0.25
Rufy3Q9D394 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rufy3Q9D394 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm13461-201ENSMUST00000120980 662 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm27552-201ENSMUST00000183351 62 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm27844-201ENSMUST00000183613 62 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Gm10288-201ENSMUST00000084614 537 ntBASIC13.46□□□□□ -0.25
Rufy3Q9D394 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rufy3Q9D394 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.46□□□□□ -0.26
Rufy3Q9D394 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.46□□□□□ -0.26
Rufy3Q9D394 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rufy3Q9D394 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.45□□□□□ -0.26
Rufy3Q9D394 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.45□□□□□ -0.26
Rufy3Q9D394 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm21811-201ENSMUST00000096485 930 ntBASIC13.45□□□□□ -0.26
Rufy3Q9D394 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rufy3Q9D394 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms