Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm25569-201ENSMUST00000157175 131 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm29067-201ENSMUST00000190821 470 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.78□□□□□ -0.52
Cldnd1Q9CQX5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Cldnd1Q9CQX5 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm9133-201ENSMUST00000118289 540 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm25343-201ENSMUST00000157460 107 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm26119-201ENSMUST00000175601 104 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm7238-201ENSMUST00000206467 973 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Id2-203ENSMUST00000222667 958 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gm25580-201ENSMUST00000083409 327 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.77□□□□□ -0.53
Cldnd1Q9CQX5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cldnd1Q9CQX5 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms