Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim11Q99PQ2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm25881-201ENSMUST00000157783 103 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm10807-201ENSMUST00000177134 795 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm8100-201ENSMUST00000182906 988 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm38151-201ENSMUST00000195085 289 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm6867-201ENSMUST00000219165 425 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm4978-201ENSMUST00000071565 801 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim11Q99PQ2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.11□□□□□ -0.31
Trim11Q99PQ2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms