Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm12463-201ENSMUST00000118271 849 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm11919-201ENSMUST00000117609 721 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Snord55-201ENSMUST00000174939 79 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm12072-201ENSMUST00000118293 715 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm13688-201ENSMUST00000121557 608 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Elobl-202ENSMUST00000082339 300 ntBASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cdh23Q99PF4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm19246-201ENSMUST00000173599 255 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm26379-201ENSMUST00000178125 138 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm4925-202ENSMUST00000168843 1561 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm22616-201ENSMUST00000179783 100 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cdh23Q99PF4 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms