Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Thumpd1Q99J36 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm26286-201ENSMUST00000104166 134 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm17150-201ENSMUST00000165577 381 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm27514-201ENSMUST00000183692 110 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm38158-201ENSMUST00000194617 339 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm5982-201ENSMUST00000196234 512 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm6266-201ENSMUST00000203844 806 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm5705-201ENSMUST00000066241 711 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Thumpd1Q99J36 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.24□□□□□ -0.77
Thumpd1Q99J36 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Gm15547-201ENSMUST00000122152 333 ntBASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.24□□□□□ -0.77
Thumpd1Q99J36 Gm43133-201ENSMUST00000197472 463 ntBASIC10.24□□□□□ -0.77
Thumpd1Q99J36 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms