Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb18Q91Y02 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Pcdhb18Q91Y02 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm15744-201ENSMUST00000161734 213 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm22877-201ENSMUST00000175451 105 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm7741-201ENSMUST00000181445 989 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm5100-201ENSMUST00000195631 589 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm9139-201ENSMUST00000218817 700 ntBASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdhb18Q91Y02 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm14219-201ENSMUST00000120414 288 ntBASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm14441-201ENSMUST00000121960 540 ntBASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm29410-201ENSMUST00000188383 694 ntBASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Gm23105-201ENSMUST00000083719 134 ntBASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb18Q91Y02 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms