Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm27516-201ENSMUST00000184237 98 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm29396-201ENSMUST00000185659 716 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm18584-201ENSMUST00000203098 964 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm5904-201ENSMUST00000210286 865 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm8420-201ENSMUST00000097103 598 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb3Q91XZ7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm12363-201ENSMUST00000122250 668 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm13786-201ENSMUST00000122371 333 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm43550-201ENSMUST00000200597 303 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm9368-201ENSMUST00000219348 831 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 AC154245.1-201ENSMUST00000224615 601 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Gm37082-201ENSMUST00000192629 1927 ntBASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb3Q91XZ7 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb3Q91XZ7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms