Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhb6Q91XZ4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm6439-201ENSMUST00000199849 862 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm44506-201ENSMUST00000206278 965 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm6722-201ENSMUST00000221586 390 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm28424-201ENSMUST00000187393 1319 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Pcdhb6Q91XZ4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm22920-201ENSMUST00000102175 109 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm12247-201ENSMUST00000117585 670 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37246-201ENSMUST00000192665 835 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdhb6Q91XZ4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms