Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Gm45118-201ENSMUST00000208928 825 ntBASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Gm4978-201ENSMUST00000071565 801 ntBASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rprd1aQ8VDS4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rprd1aQ8VDS4 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Rprd1aQ8VDS4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rprd1aQ8VDS4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm15352-201ENSMUST00000118696 270 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm7150-201ENSMUST00000122032 981 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Mir1943-201ENSMUST00000158276 73 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm18065-201ENSMUST00000221395 526 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rprd1aQ8VDS4 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rprd1aQ8VDS4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms