Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm29067-201ENSMUST00000190821 470 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm44323-201ENSMUST00000198689 129 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm5599-201ENSMUST00000209602 788 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Mir453-201ENSMUST00000104732 82 ntBASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp7Q8R1T1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp7Q8R1T1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp7Q8R1T1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chmp7Q8R1T1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
Chmp7Q8R1T1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Gm16030-201ENSMUST00000159098 603 ntBASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Gm5621-201ENSMUST00000187303 640 ntBASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Chmp7Q8R1T1 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Chmp7Q8R1T1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms