Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm13809-201ENSMUST00000117921 597 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm11941-201ENSMUST00000119904 610 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm15566-201ENSMUST00000121130 590 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm29499-201ENSMUST00000189151 486 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm28329-201ENSMUST00000191208 689 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm29171-201ENSMUST00000191397 486 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.86□□□□□ -0.67
Clrn1Q8K445 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm20614-201ENSMUST00000177106 632 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm19891-201ENSMUST00000189771 303 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm6108-201ENSMUST00000208365 367 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm4978-201ENSMUST00000071565 801 ntBASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clrn1Q8K445 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.84□□□□□ -0.67
Clrn1Q8K445 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clrn1Q8K445 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms