Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Mir6546-201ENSMUST00000184460 62 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm28686-201ENSMUST00000187404 609 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm6905-201ENSMUST00000205729 511 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Gm10288-201ENSMUST00000084614 537 ntBASIC11.8□□□□□ -0.52
CopaQ8CIE6 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CopaQ8CIE6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm15131-201ENSMUST00000119124 595 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm13461-201ENSMUST00000120980 662 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm18893-201ENSMUST00000198416 943 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm44126-201ENSMUST00000204831 514 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.79□□□□□ -0.52
CopaQ8CIE6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CopaQ8CIE6 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.78□□□□□ -0.52
CopaQ8CIE6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopaQ8CIE6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopaQ8CIE6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CopaQ8CIE6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
CopaQ8CIE6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CopaQ8CIE6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms