Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm14270-201ENSMUST00000118388 846 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm13422-201ENSMUST00000118834 504 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm16219-201ENSMUST00000120096 274 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm15549-201ENSMUST00000121595 622 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm10263-201ENSMUST00000085163 300 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.27□□□□□ -0.61
Rab43Q8CG50 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm4294-201ENSMUST00000105169 614 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm14395-201ENSMUST00000120494 563 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm11960-201ENSMUST00000122068 925 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm17825-201ENSMUST00000206836 794 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm43334-201ENSMUST00000197740 1318 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.26□□□□□ -0.61
Rab43Q8CG50 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab43Q8CG50 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.25□□□□□ -0.61
Rab43Q8CG50 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Rab43Q8CG50 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms